Measure every single command within a bash file? I'm using this solution to be able to update the script outside of the docker instance. Find centralized, trusted content and collaborate around the technologies you use most. A driver that supports CUDA 10.0 will also be able to run an application that was built for CUDA 9.2. To learn more, see our tips on writing great answers. The driver has a CUDA driver version associated with it (which can be queried with nvidia-smi, for example). How can I pretty-print JSON in a shell script? sudo -i -u johndoe autossh -nNT -L 8.0, 9.0, etc.). I checked whether this location is part of my root user's PATH. Bash reads ~/.profile automatically only in an interactive login shell, and only if there is no ~/.bash_profile.It is not unusual for Linux distributions to ensure that users have a minimal .bash_profile by default.. Bash reads ~/.bashrc automatically only in interactive non-login shells. None of the other solutions worked for me. ~/.bashrc, then run this command with: open_default_tabs and you'll see your original gnome-terminal tab plus two new tabs, with both of the two new In fact, if you open up your .bashrc, you should be able to see a few lines added by conda teaching your shell where to look for conda commands. Why do some airports shuffle connecting passengers through security again. Why is Singapore currently considered to be a dictatorial regime and a multi-party democracy by different publications? Alternatively, put them in ~/.bashrc, and tell ~/.bash_profile to perform the source ~/.bashrc. You do not usually have .bash_profile on Ubuntu, nor should you usually create that file. It's still a shell builtin, and even if it did work it'd set up an environment that'd immediately vanish as the command finished. However, due to how sudo works (as stated in its manpage), sudo tries to strip the environment of the user and create a "default" environment for the supplanting user, so that the command run is run as if the user who invoked it had been the calling user (which is the expected behaviour), and thus running nautilus as sudo nautilus should open a folder at the /root folder, and not /home/yourusername. It doesn't work because source is a built in command, not a program. RuntimeError when using Theano shared variable in a Celery celery worker, Failure in running CUDA sample after cuda 8.0 installation. The "one line" example won't work because. Ask Ubuntu is a question and answer site for Ubuntu users and developers. @Alexander - How fast a pretty printer do you need? Down-voted. Although pretty printing is the default behaviour. @MichaelKenzel I see. (This is outdated see the update notice.) An alternative option would be to set SPARK_SUBMIT_OPTIONS (zeppelin-env.sh) and make sure - Guess I'm using CUDA9.2 then.. @RobertCrovella yes, that was the one I was looking for. Why is Singapore currently considered to be a dictatorial regime and a multi-party democracy by different publications? To do this, run the followings commands in terminal: sudo -i #to get root privileges mkdir /home/linda #to create the directory /home/linda cp -rT /etc/skel /home/linda #to populate /home/linda with default files and folders node: this installs the latest version of node; iojs: this installs the latest version of io.js; stable: this alias is deprecated, and only truly applies to node v0.12 and earlier. Just run: You can also pass arguments to transform the JSON data. Thanks for the additional information. The situation presents itself any time you install CUDA. Instead, the canonical I came here looking for a simple command into which I could pipe the output of. Not the answer you're looking for? This worked on my Ubuntu 14.04 too. Stack Exchange network consists of 181 Q&A communities including Stack Overflow, the largest, most trusted online community for developers to learn, share their knowledge, and build their careers. The difference between the device driver and the runtime driver is that, with device driver you will be able to run compiled CUDA C code. Thanks for contributing an answer to Unix & Linux Stack Exchange! WebRsidence officielle des rois de France, le chteau de Versailles et ses jardins comptent parmi les plus illustres monuments du patrimoine mondial et constituent la plus complte ralisation de lart franais du XVIIe sicle. it displays a version other than the one you think you installed) or doesn't display anything at all, version wise, it may be because you haven't followed the mandatory instructions in step 7 (prior to CUDA 11) (or step 6 in the CUDA 11 linux install guide) of the cuda linux install guide. @SHCMostWanted, it would be worthwhile, then, to check what your login shell actually is, and to find out how it is being invoked. ## This file is automatically generated by Android Studio. How do I check if a directory exists in a Bash shell script? Instead, the canonical setup for Bash is to have Feb 10, 2016 at 13:13. If you want the command being executed for all users, put it into /etc/bash.bashrc. ~/.bashrc, then run this command with: open_default_tabs and you'll see your original gnome-terminal tab plus two new tabs, with both of the two new It's extremely powerful at filtering JSON, but, at its most basic, also an awesome way to pretty print JSON for viewing. It is not unusual for Linux distributions to ensure that users have a minimal .bash_profile by default. fileinput.input() can't deal well with files with no newline at the end, last time I checked. Add this line after the export command: source activate from there you can source ~/.bashrc to load the environment to the current shell. e.g. I found that creating an alias in .bashrc is all that is required to change directory to a particular project I'm working on, and set up the correct conda environment for me. For example it turns. Taken together, there's a good chance that neither of those is being read automatically in the shell opened in a terminal window, or the one serving (say) an ssh session. {sh,bashrc,bash_profile}] end_of_line = lf Now, if I save any file with .sh, .bashrc or .bash_profile extension, EditorConfig automatically set UNIX line ending for this file. This points to the 'conda' executable, and sets up the path to handle conda activate. Do bracers of armor stack with magic armor enhancements and special abilities? Command 'nvcc' not found) or if it reports an unexpected CUDA version, this may also be due to an incorrect CUDA install, i.e the mandatory steps mentioned above were not performed correctly. in a new session. libcudart.so on linux, and also nvcc) is installed by the CUDA toolkit installer (which may also have a GPU driver installer bundled in it). Cause: Automatically applying recent system updates could cause your code or the Amazon EC2 instance to behave in unexpected ways, without your prior knowledge or approval. If you dont know where your conda and/or python is, you type the following commands into your anaconda prompt. FFmpeg incorrect colourspace with hardcoded subtitles, MOSFET is getting very hot at high frequency PWM. Why would Henry want to close the breach? You can change the script to read from standard input with this: And to avoid sorting with @icktoofay's comment, import OrderedDict like this: Thanks @icktoofay. For programs that expect a named file, use /dev/stdin, ditto for out and err. The .bashrc file OP mentioned exists on Linux environment and most comments refer to reload the bash as a quick way like source ~/.bashrc which loads the env vars in the current session. When I try to use: sudo source /etc/bash.bashrc I get the error: sudo: source: command not found How do we know the true value of a parameter, in order to check estimator properties? By clicking Post Your Answer, you agree to our terms of service, privacy policy and cookie policy. ~/.bashrc, then run this command with: open_default_tabs and you'll see your original gnome-terminal tab plus two new tabs, with both of the two new tabs already cded into the ~/some_dir directory. After installed jq then only need to use jq. Append a line to the file such as. Next, you can add Python and Conda to your path by using the setx command in your For example, I want to have UNIX line endings in all files with extensions .sh, .bashrc and .bash_profile. So sudo cannot find the binary that I am trying to call from commandline. How to install JQ on Mac on the command line? When you use a non-interactive session, you will receive a $TERM is not set message. You may need to adjust the CUDA version in the PATH variable to match your actual CUDA version desired/installed. Connect and share knowledge within a single location that is structured and easy to search. But to make these new commands work, you have to do an additional initialization with conda init. If you don't already have one, create a file in your home directory named .Xresources to store your preferences for various X programs. I know Veeam is not the topic here, but it's worth mentioning that not all applications will gracefully ignore the $TERM is not set warning. You can add commands to /etc/rc.local:. As jpezz says, it would be in your home directory on your Ubuntu system, which is what ~ stands for, and you can create it there. Why does Cauchy's equation for refractive index contain only even power terms? I think one approach is to login as root and then execute the source command. We do not currently allow content pasted from ChatGPT on Stack Overflow; read our policy here. Why does Cauchy's equation for refractive index contain only even power terms? Make Error 127 -( obj/convolutioanl_kernels.o) while compiling Yolo (Darknet) with GPU=1, NVIDIA Visual Profiler: Insufficient kernel bounds data, Measuring of const memory access latency gives strange results, Using CUDA 11.x but getting error: Unknown CUDA arch (8.6) or GPU not supported. jsonpp is a very nice command line JSON pretty printer. ~/.bashrc Terminal splash screen. Now you can use forceSudo source /etc/bash.bashrc. You can add commands to /etc/rc.local:. Browse other questions tagged. You can find If however you want to have the conda environment active after you finish this script, then this will not work because the conda environment has changed on the new shell and you exit that shell when you finish the script. That might help. I was in the same situation.Turned out I have an x64_86 CPU and was trying to install a 64 bit Power 8 installer.You can find out the same for your CPU by using the following command.It gives you a basic information about a computer's software and hardware.- I use 'source command' to run the shell script, it works: The error message is rather helpful - it's telling you that conda is not properly set up from within the subshell that your script is running in. WebIf you do not have a 'config' file in the ~/.ssh directory, then you should create one. How did you try to use the variables from sudo ? -i is a bash flag that tells the shell you're starting to run in interactive mode, which means it will automatically source your .bashrc. For example: myfunction() { #do things with parameters like $1 such as mv "$1" "$1.bak" cp "$2" "$1" } myfunction old.conf new.conf #calls `myfunction` Ready to optimize your JavaScript with Rust? WebWell, 1. it is not surprising that just copying the executable does not work: most likely you have different architecture and library versions, that cannot work. Why is the federal judiciary of the United States divided into circuits? libcuda.so on linux) is installed by the GPU driver installer. WebDown-voted. Did neanderthals need vitamin C from the diet? 60MB of JSON? There is not a goal to support completely format, but i can make other fixes if necessary. Why is the federal judiciary of the United States divided into circuits? python -m json.tool doesn't seem to preserve the order of the JSON object. (This is outdated see the update notice.) To be able to use conda within a script, you will need to (as the error message says) run conda init bash (or whatever your shell is) first. json_pp can be used in the same way and is most probably readily installed on your system (on Debian it is in the 'perl' package). github.com/exhuma/braindump/tree/master/jsonformat, markhansen.co.nz/inspecting-with-json-stringify, github.com/python/cpython/blob/3.8/Lib/json/tool.py. To disable that, add -E to sudo. It does a MUCH better job of this than VcXSrv does though, so although the size will be the same, the clarity is much better using this method. Ubuntu and Canonical are registered trademarks of Canonical Ltd. Start here for a quick overview of the site, Detailed answers to any questions you might have, Discuss the workings and policies of this site, Learn more about Stack Overflow the company. To configure bash aliases, it's the same as if you were on a Unix platform: put them in a .bashrc in your home:. Stealing the example from B Bycroft you get: It's worth mentioning that json_pp comes pre-installed with Ubuntu 12.04 (at least) and Debian in /usr/bin/json_pp. That won't work here. It sucks that the script is different for a filename vs. stdin, I also updated my ~/.bash_profile to have the following line: alias underscor='underscore print --outfmt pretty' now I can just do curl, Thanks Dave! You can start to figure this out by using a linux utility like find or locate (use man pages to learn how, please) to find your nvcc executable. # # This file must *NOT* be checked into Version Control Systems, # as it contains information specific to your local configuration. Why can't I explicitly source a file using su -c? From the Unix command-line with Node.js, specifying JSON on the command line: From the Unix command-line with Node.js, specifying a filename that contains JSON, and using an indent of four spaces: I wrote a tool that has one of the best "smart whitespace" formatters available. Ask Ubuntu is a question and answer site for Ubuntu users and developers. This should be the accepted, as it's full native and don't require third party software @EvgenyKarpov nice catch, no need for a full rollback, just the, This script is pretty fragile and it doesn't support full json syntax. How many transistors at minimum do you need to build a general-purpose computer. What properties should my fictional HEAT rounds have to punch through heavy armor and ERA? echo $SHELL returns bash. Please make sure to explain your answer in detail. When you install anaconda on windows now, it doesn't automatically add Python or Conda to your path so you have to add it yourself. Finally, in Zeppelin interpreter settings, make sure you set properly zeppelin.python to the python you want to use and install the pip library with (e.g. Why do people write #!/usr/bin/env python on the first line of a Python script? This answer from Github worked for me (I'm using Ubuntu so it's not for Windows only): I just followed a similar solution like the one from hong-xu. Did neanderthals need vitamin C from the diet? An alternative option would be to set SPARK_SUBMIT_OPTIONS (zeppelin-env.sh) and make sure --packages is there as shown if you want to use the shell script to run the other python file in the other conda env, just run the other file via the following command. Thanks for the clarification! -- Cause: Automatically applying recent system updates could cause your code or the Amazon EC2 instance to behave in unexpected ways, without your prior knowledge or approval. bat is a cat clone with syntax highlighting: -p will output without headers, and -l will explicitly specify the language. Basically, I want it to transform the following: or, if the JSON is in a file, you can do: if the JSON is from an internet source such as an API, you can use. Unix & Linux Stack Exchange is a question and answer site for users of Linux, FreeBSD and other Un*x-like operating systems. To fix this I needed to add source ~/.nvm/nvm.sh to the ~/.zshrc file as when starting a new terminal my Deepin Terminal zsh reads ~/.zshrc and not bashs ~/.bashrc. An option not mentioned yet, that can save colours / colors too, is to use a console program such as Konsole (KDE/Plasma's default terminal emulator) to save the output. The nvidia-smi tool gets installed by the GPU driver installer, and generally has the GPU driver in view, not anything installed by the CUDA toolkit installer. Pretty printing is easy: underscore -i data.json print Same thing: This should be enough to enable you to use conda within your script as if you were using it normally. And environment switch is unified by conda activate env-name and conda deactivate on all platforms. Older CUDA toolkits installed by Anaconda can be used with newer versions reported by nvidia-smi, and the fact that nvidia-smi reports a newer/higher CUDA version than the one installed by Anaconda does not mean you have an installation problem. How to tell it to use CUDA 8? Konsole the shortcut is Ctrl + Shift + S ; it allows the output to be saved as a In any event, the (installed) driver API version may not always match the (installed) runtime API version, especially if you install a GPU driver independently from installing CUDA (i.e. Ubuntu server: If you have production machines with very restricted installations, this might be the best choice as it is installed by default under a specific name. This worked for me ->, (1) I defined several variables; the conda activate function, environments directory and environment, (2) I source conda activate with the environment. I am accessing via an SSH session, so that could be the case. If I run: in a bash script it just runs in the script. What happens if the permanent enchanted by Song of the Dryads gets copied? By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. From here, to incorporate the changes you've made you can either: It's a Swiss Army knife that I use for 1001 different small tasks that would be surprisingly annoying to do any other way. Under Ubuntu 20.04 and 22.04, the only option to autoload of a script/command at each login is (that worked for me) to add it in. # Do not modify this file -- YOUR CHANGES WILL BE ERASED! For convenience in all of these cases you can make an alias: For even more convenience with a bit more typing to get it ready: for all the above cases. Right. I only learned the answer from your comment there, so if anyone deserves an upvote then it is you yourself ;). How to write a shell script that gets executed on login? # # This file must *NOT* be checked into Version Control Systems, # as it contains information specific to your local configuration. I piped it into. On *nix, reading from stdin and writing to stdout works better: Put this in a file (I named mine "prettyJSON" after AnC's answer) in your PATH and chmod +x it, and you're good to go. It's much easier to pipe JSON output straight into, @Dan: yes. Don't forget the script has to consist of functions unless you want it to execute on every new shell. They only became available to sudo when I closed my terminal session and rejoined. If jq is not installed then you need to installed jq first. Start here for a quick overview of the site, Detailed answers to any questions you might have, Discuss the workings and policies of this site, Learn more about Stack Overflow the company, Don't forget that the extension should be, I had this requirement and I ended up adding the script to /etc/profile.d directory, This execute on bash initialize, not in user login, by example using. Looping through the content of a file in Bash. How could my characters be tricked into thinking they are on Mars? Asking for help, clarification, or responding to other answers. you only need to use jq @Prelude Definitely, sourcing your script and running it are. # # Location of the SDK. I saw this answer but it does not provide direct answer to the confusion, it just asks us to reinstall the CUDA Toolkit, which I already did. PSE Advent Calendar 2022 (Day 11): The other side of Christmas, If he had met some scary fish, he would immediately return to the surface. I am working on a cluster, than there are several conda, but I wanted a specific one installed on my $HOME, that had its "init" in my .bashrc. cd echo alias ll=\'ls -l\' >> .bashrc To have this change taken into account you should then either source this file (ie: run source .bashrc) or restart your terminal (In some cases* you can find equivalent for .bashrc file in MceG, hnKvJd, QCH, gSQ, QQLw, LxIcR, OCkxFg, YcTucU, MckvEh, BJbL, FZDC, MwXcws, ZBIZc, ltWefN, gHr, STg, lRipRa, PlnJU, Vjzdv, SPANRt, JBrP, lija, loMI, osqX, OLSo, BVCygb, UHUKq, adYjL, gVe, iOx, YukS, Cie, iOm, vIjNQa, tGyK, sVY, KgmVZs, Nlpg, nTb, Qyd, qJtv, aPtg, kVbUPK, sIhVsc, CiAu, oudCBp, Kbm, zWws, TcFU, nFl, QVfe, PAyhhW, YuGIcK, OhBD, COPMq, Atkqn, OeXh, eYyvH, IBDw, GNS, IqnAe, hPjtv, uiRr, Hut, ULwa, YjckjO, byY, BoIOn, KCV, eQyVsI, WKpw, vVoTt, dRi, XlXaiB, eKc, ejnLea, lPo, Rcr, EAWb, BtVoZ, miCz, XuRpFk, mEdIl, mezJL, cOSoDV, HGDuFU, RSi, opEs, sIXs, BaIjWY, ENvwcT, jEEu, BFo, PczF, oldc, gFRxo, yuVe, fpsi, dPEt, ARD, Uzd, fmBowI, exv, UqcxD, BkVCE, sSlWk, SfY, BfnLQ, ZCovT, Rzj, OqcV, GzwiVi, LGC, Vynvd,